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Eventually, humans invented agriculture, which could be understood as a way of turning the natural world into a tool for our use. There's evidence that we have been domesticating crops and animals for at least 15,000 years, adapting ecosystems to our preferred way of life.

Quotes of Annalee Newitz:

There are plenty of publicly-funded organizations and nonprofits that are trying to develop GMO crops that could help feed people in developing nations by producing disease-resistant or drought-resistant strains of staple crops like cassava or bananas.
GMO agriculture will probably save the world in this century. But in the developed world, where few people are haunted by the specter of famine, people are free to fetishize heirloom tomatoes and worry about the provenance of what sits on their dinner tables.
Imagining the world without us is a recipe for despair and paralysis. I actually think it's more helpful to imagine the world before us, to look back at those unstable ecosystems of the Triassic and realize that were in another phase of unstable ecosystems. Knowing that, demystifying our situation as it were, makes it easier to think about solutions. We are not looking into the unknown. The only thing unknown about the situation is how we're going to fix it, and when.